rs229088952 SNP Detail

Summary

• ID
  rs229088952
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:58066567 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCA CCCCCAGCTC CATTTACTTA
  S
  TTGGGCTTCT TTGTTTATTT GTTTT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320782510	CHEV_3_57963068	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229088952					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:58066567 () rs orientation: forward

Symbol	Name	Function Class
1700007F19Rik	RIKEN cDNA 1700007F19 gene	within coordinates
4921539H07Rik	RIKEN cDNA 4921539H07 gene	within coordinates
Gm40056	predicted gene, 40056	within coordinates
Rr577194	regulatory region 577194	347 bp proximal
Rr577195	regulatory region 577195	461 bp proximal