rs229188499 SNP Detail

Summary

• ID
  rs229188499
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117640627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGGAAATG ATCTTAGGAG
  CAACTGAAAA ACTAAAATCG TTATCACAGG ACATTCTCTA GCTAAACCAC AAAACCATTA
  CTGCACACCC AGCACCCGAG TTCCCGTCTT CACATCTCTG CAGTCGCAGA CGTCCTGTAA
  GCCCTGCGCA CATCCACATT CGTTGGAGGA CTTATCAGAA AACAGTTTGG CTGTTTAATT
  R
  GGACAGCTTT TATTCTGTCT GGGTGGTATT CTGCGAATGC GGCTGGCATG GTCTTTACTC
  ATTGGGAAAT GAAAGTCACA CTCAGGTTTT TCTCTTCTCT GGTCTTCAGT GTTACCACGC
  CCTTATTCTG CCTGGTTTGA AGGGTCGGGG AGAGTGCCAG GGGTGTCTCT CCAAAGTCTG
  GAGGCTCCTC TCTGTTCTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499613	CHEV_10_117241778	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229188499					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117640627 () rs orientation: forward

Symbol	Name	Function Class
Gm67590	predicted gene, 67590	within coordinates
Rr218193	regulatory region 218193	574 bp proximal
Rr221673	regulatory region 221673	1589 bp proximal
Rr225990	regulatory region 225990	within coordinates
Rr385360	regulatory region 385360	544 bp upstream