rs229277768 SNP Detail

Summary

• ID
  rs229277768
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13304506 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCTACTCT GTCAGCACCT
  TGGTGAGTTG TGCCCCCTGC TGGCAGAGCG ACATACCACA ATGAGAACAT ACTGCTCCAT
  CCCGGTTCCT TGACCATCTG CTCTGCCCTA CCTTCAGACA GACACACTCC TTTTGCCCCT
  TCTTGTCTGC CCTCTTTCAC TCAGCATAAA ACTGAGGCCC ACCCATTGTA GTTTTATGCT
  Y
  TTAGAAAACT TTTCTGGCTG GGCAGTGGTG ATACACGCCT CTAGTTTCAG CATTCAGCAT
  TCAGGAGGCA GGGGCAGGTG GATCCCTGAG TTTGAGGCCA ACCAGGTCTA CAGAGTGAGT
  TCCAGGACAG CCAGGGCTAC ACAGAGGAAC CCTGCCTCAA AAACAAAACA AAAAAAACAA
  AACAAAAAAA AAACCAACAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505549	CHEV_8_13254506	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229277768					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13304506 () rs orientation: forward

Symbol	Name	Function Class
Adprhl1	ADP-ribosylhydrolase like 1	344 bp upstream
Dcun1d2	defective in cullin neddylation 1 domain containing 2	1457 bp downstream
Rr175514	regulatory region 175514	within coordinates
Rr186316	regulatory region 186316	305 bp distal
Tssr80430	transcription start site region 80430	463 bp upstream
Tssr80431	transcription start site region 80431	421 bp upstream
Tssr80432	transcription start site region 80432	387 bp upstream
Tssr80433	transcription start site region 80433	356 bp upstream
Tssr80434	transcription start site region 80434	338 bp upstream
Tssr80435	transcription start site region 80435	318 bp upstream
Tssr80436	transcription start site region 80436	237 bp upstream