rs229284222 SNP Detail

Summary

• ID
  rs229284222
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:70339241 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAGACATG TAGCAGGGAC
  AGGAAATTGA CTGGTCATGT GCACACCACA GAGGAGAGAG AGAACCAGAA GTGAGGCGAC
  CTCGTGGCTC CTACCTAGTG ACCTGTTTCC TCCAGTGAGG TTCCACCTCC TCCAGGTTCC
  ACAGTCTGTG CCAACAGCAC TACCAGTTGG AGATCAAATG CTCAAACCCC TGAATCTGGG
  R
  GAAAGTTCAC TGCCAAACAA CAGAACCCCA TTGTAAATTT CCAAACTGGT GTAGGTGATA
  AGATATAGAC GACAAACTAT GAGCATGAAA CCAATACTCA TTGATCTCCT GATAGCAATA
  GAAAGCTTCA CGGAGTCTTA GTGATGATTT GTTCAAAGGG GATATGCTTT TAAGTGTTTA
  CAAATGATCA AAGCGAAGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323357286	CHEV_10_69966159	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229284222					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:70339241 () rs orientation: forward

Symbol	Name	Function Class
Fam13c	family with sequence similarity 13, member C	within coordinates
Gm29783	predicted gene, 29783	1469 bp downstream
Gm55389	predicted gene, 55389	1908 bp upstream
Rr228592	regulatory region 228592	1961 bp proximal