rs229284946 SNP Detail

Summary

• ID
  rs229284946
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4273902 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    caatatagt acttgatgtt ctagctagag
  caggaagaca actaaaggag accaaggggt acaaattgga aaggaagaag tcaaagtacc
  gaaatttgca catgatgtga tagtatatgt aagtaacccc ccaaatccta ccagttggct
  R
  gatacacgat taactcaaaa atcagtagcc gtcctatata cacataacaa atgggctgag
  aaagaagtca gagaaatacc tttcacaata gccacaaata atataaacta tcttgggggg
  gatgaaggga gagagtactg ggagagacaa                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873744	CHEV_12_4223902	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229284946					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4273902 () rs orientation: forward

Symbol	Name	Function Class
Cenpo	centromere protein O	within coordinates
Gm17816	predicted gene, 17816	1883 bp upstream
Gm48210	predicted gene, 48210	541 bp downstream
Tssr112550	transcription start site region 112550	1819 bp upstream