rs229291528 SNP Detail

Summary

• ID
  rs229291528
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:37918616 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGCCTGTA GAAGTCTCTG
  TGGTTCTGGG GGTCTACTGC CTTTTGGACT CCAGCATGCT TCTCCAGGAC ACACAGAACC
  CTTCCTCTTC AGGGCCTCCA TACTAGTCGC TGCCAGTTCC TGGGGTGCTG TTTCTCCATT
  GGCACGGCTC GCTCTCTGCA CCTGGTACCA ACCTCAGCCC GCCTCTAGCC TCCCTTCTCA
  R
  CTGAGAGCTG AGCCAGGACC CTGTCCATCT TGGTCACAGC TGTGCCTCTG GCATCTGGCA
  GGGAATACAC GTCTCAGTAG CTTAGCATAA GTGAACTCCT TTCCAAGGTT GTTGACCATC
  CAGGGCCCTT GTGGTCTCCA ACATCTTGGA GTTTAGGGGA GTAACATCCT AGTCTTAGGT
  CTGTGGGAGA GGGAGTCAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322180549	CHEV_7_39004211	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229291528					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:37918616 () rs orientation: forward

Symbol	Name	Function Class
Plekhf1	pleckstrin homology domain containing, family F (with FYVE domain) member 1	1462 bp downstream
Rr645765	regulatory region 645765	990 bp distal