rs229302505 SNP Detail

Summary

• ID
  rs229302505
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:30355235 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCTCCTTG ATTTTATAAA
  GACACATGCA GCTATGTGTG AGCATACACA TAAAACTGTC CCATAGAAGT AAAACTGCCC
  AAGGAAACAA AGTGGACAAA AGGGAATGGG GGAGGGGAGA GGGTAGGGTC AGGGGATAGG
  GGACAGTGGG ATGGCTAATA ATGACTGTCA ACTTGATAGG ACTTACAGTC ATCTAGAAAA
  Y
  AAGTCTCCTG GGCAGGCATG TGTAAGGTAG GTCGGTTCCG TGGGTAGTTC CACCCTGAGA
  GTAGTCAGCA CTATTTTTGG GGTGGGTCCT GAACTGCTCA GAACAGAGGG GGGAGGGGCT
  GAGCACAAGC ATCCATCTTT CCCTGCCTCC TGGCTGTGGA TGCAAGTGAC CAGCTGCCTC
  AAACTCCATG CTGGACTGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325130495	CHEV_16_30536503	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229302505					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:30355235 () rs orientation: forward

Symbol	Name	Function Class
Rr514267	regulatory region 514267	1019 bp distal
Rr514268	regulatory region 514268	722 bp distal
Tmem44	transmembrane protein 44	within coordinates
Tssr137879	transcription start site region 137879	333 bp downstream