rs229338358 SNP Detail

Summary

• ID
  rs229338358
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:70340558 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTATCTTT GCCTCTAGAG
  TGCTGGGTTC TAAAGGCGTG TGCCACCATG CTCAGCTCAG TTTTCTCTCC TTTTCCCTTT
  CTTTCTTCCT TTCTTTCTAG ATTGGTTTTC TTATTTATTT TTAAAGATTT ATTTTATTAT
  TTATATGAGT ATAGGTGTCT TCAGACACAC CAGAAGAGGG CATCAGATCC CATTACAGAT
  R
  GTTGTGAGCT ACCATGTGGT TGCTGGGATT TGAACTCAGG ACCTCTGAAA GAGCAGTCAG
  TGCTCTTAAC CACTGAGCTA TCTCTCCAAC CCTATTTGTT TGTTTATTTA TTTGCCAGTC
  AGTCTTGCGC TTTATTGTTG TCGCCGCCTC AGGCCTTGAC TGCATACTTG CGACATGGGT
  ACAGCCACTC CTTCCGCTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323357303	CHEV_10_69967476	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229338358					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:70340558 () rs orientation: forward

Symbol	Name	Function Class
Fam13c	family with sequence similarity 13, member C	within coordinates
Gm29783	predicted gene, 29783	152 bp downstream
Gm66439	predicted gene, 66439	1035 bp downstream
Rr216098	regulatory region 216098	1843 bp proximal
Rr228592	regulatory region 228592	644 bp proximal