rs229355305 SNP Detail

Summary

• ID
  rs229355305
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:27618432 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTAAGGAAA TACGGATGTG ACTCCCTGCA
  GAGTCTGGGT GGAGAGCGGG AGACCCAGAG TGGATGGAAG CCCGGCTGCA GACGGCCTCT
  GAGAAAACAG GCCTGTCACC TTTAGCAGGA ACCAGAAAGC AGGGTATTCT GTGACTGAGG
  Y
  CACACAGAAG GGCCTAGAAC ACAGGTTTGT AAGAATTAGG GCTAAGGTGG ACATCTTTCA
  GATTGAAGAC ATGAGTTGAA CTCTAAAGAC GAGTAAGTTT CTAAAATAAT AATAATGATG
  ATAATGAGGA GGAGGAGGAA GGAGGGGGGA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324901639	CHEV_15_27548101	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229355305					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:27618432 () rs orientation: forward

Symbol	Name	Function Class
Otulin	OTU deubiquitinase with linear linkage specificity	within coordinates
Rr500146	regulatory region 500146	514 bp proximal
Tssr133864	transcription start site region 133864	921 bp downstream