rs229360142 SNP Detail

Summary

• ID
  rs229360142
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172696191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACACACA CACACACACA
  CACACACACA CACACACACA CACAAAGGTG TTGGCAAGAG GAAATAGGTC AGCTGGTAGC
  ACAGGGCAAT GGTCCAGGTA GTCTATCTGG ATGCTGGCTG CAGGCCTGCT AGCCTCTGTT
  CTCCCCTTCT GCATTGTCCT TGGACTCCCC AGAGCCAGGG CCTGCCCCCA AACATGCCTG
  T
  GGTGTATTTG TTCCCTCCCT GACTCACTTC CTTACTCCCC TCCCCACAAC ACATCCCACA
  ATCCTGTGCC ACCTTCTGCA GCCAGCTGAG CCCCACAGAT GACTTGCCTA GCACAAACAG
  CACGGTCCCT CTGCTGCTGC TGCCACCAGT CCATCCCACA CTCAGACTGG CTCTGGACAA
  CCAGCACCAT GAATGTCATA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320620544	CHEV_2_172679899	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229360142					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172696191 () rs orientation: forward

Symbol	Name	Function Class
Gm36254	predicted gene, 36254	within coordinates
Rr571755	regulatory region 571755	42 bp distal
Rr571756	regulatory region 571756	within coordinates
Rr571757	regulatory region 571757	1855 bp proximal