rs229376317 SNP Detail

Summary

• ID
  rs229376317
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116205657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    acacacaca cacacacaca cacacacaTC
  TGCATACACA TGAACAAGTA CGCACATAAA ACACTCATAT GCACACATAA GTCTTAGAAA
  GAAATAACTT ATGCTAAGAT CCCAACTCAG AAACTCACCA ATCTGCCACC CAAGTGAGCC
  Y
  GATTCGTAAG GAAGCCAAAA AAAACAAAGT TGGATTGTTT CTTTTTAAAG CTTTCTATGA
  GCCCATGCAT GCCTTTTAGC CGTGTTCATA CGTCTCACAC AGAGTCTAGC CTTGTTTCAG
  ACTCAACGTG CAGAAAACAA GTTTTCTGGG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320894893	CHEV_3_116114926	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229376317					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116205657 () rs orientation: forward

Symbol	Name	Function Class
Cdc14a	CDC14 cell division cycle 14A	within coordinates
Rr70202	regulatory region 70202	within coordinates
Rr78756	regulatory region 78756	458 bp distal
Rr78757	regulatory region 78757	1995 bp proximal