rs229386318 SNP Detail

Summary

• ID
  rs229386318
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:4842992 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCACA CAGGCCGTTT CTGACTAAGT
  Y
  AGTGACCCCC AAGCCTCAGA GCATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319612294	CHEV_1_4762850	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229386318					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:4842992 () rs orientation: forward

Symbol	Name	Function Class
Gm6123	predicted gene 6123	570 bp downstream
Mrpl15	mitochondrial ribosomal protein L15	440 bp downstream
Tssr5799	transcription start site region 5799	1647 bp downstream