rs229423996 SNP Detail

Summary

• ID
  rs229423996
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:4294342 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATTTTAAA CTTAGGCCAA
  TAATTATTAT TATATCATTT TCTCCTGCTA ATTTGTAGAG GTTAATGTAA GCTATAAAGC
  ATTAAGAGCT GGGAGATAGC TCAGTGCTAA AACTCTTGCC TAGCAACCAT GGGACTGATT
  CTCCAGAACT CTTATAAGAT TCCAAGTGGA TGTGGTGCTC TCCTCTATCT CCAGCCTTGT
  M
  GGCAGACAGG GGATCCCCAG AATAATCCGG CAGGTGAAAA TAGCCATATT GGTGAGCTCT
  GATCTGATGG AGAGACCCTC CCCTAGGAAA TGAGGTACAA TTGCTAAGAG GATGAAGCCT
  GATAAAAACC TCAGGTTTGC ACACACACAC ACACACACAC ACACACACAC ACACACACAC
  CCATGCAAAC AAGAATAAAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324213457	CHEV_13_4243589	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229423996					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:4294342 () rs orientation: forward

Symbol	Name	Function Class
Akr1c19	aldo-keto reductase family 1, member C19	within coordinates
Gm61344	predicted gene, 61344	within coordinates
Rr474456	regulatory region 474456	615 bp proximal