rs229466551 SNP Detail

Summary

• ID
  rs229466551
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106016670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTCTTTATT TCTGTTAGTA
  GGATTCTTAC GTTTGCCTTT CGCCATCTGG TAATCTGTGA AGCTAGCTGT TATAGTTGTC
  TCTGTTAAGA GCTTGTTCTT CAGGTGACCC TGTTAGCCTC TATAAGCAGA TTTGGGAGGG
  TAGCTCTTAC CTTAGTTTGA GTGGGCAGAG TATTCTCTGC AGGCAAGCTC TCTTCTTGCA
  R
  TGCATGAAAG CTCACTATAC TCCTTTTCTA ACCTATGTAG CCCTCACTAG TCTACAAGGG
  AGGGAGTACA TTCTGCTCTT AATATAATAT ATTATATCTA TCTGGCAAAA CAACTTATGC
  CATCTCAAAC TTTCTTTCAT TTACCCTAGC TCCCTAAAAC TATTTAAATC TAATCAGGAA
  GTATATAAAA TCATTAATTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322371137	CHEV_7_113560977	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229466551					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106016670 () rs orientation: forward

Symbol	Name	Function Class
Gvin-ps6	GTPase, very large interferon inducible, pseudogene 6	385 bp downstream