rs229486101 SNP Detail

Summary

• ID
  rs229486101
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51367057 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCCT GGTTTCAGGC ATACAGAGAG
  Y
  ATAGAGGTCA TTTGGGTCAT TAGTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324621302	CHEV_14_51749275	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229486101					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51367057 () rs orientation: forward

Symbol	Name	Function Class
Rnase6	ribonuclease, RNase A family, 6	within coordinates
Rr404085	regulatory region 404085	622 bp downstream
Rr491778	regulatory region 491778	1023 bp distal
Rr491779	regulatory region 491779	522 bp distal
Rr491780	regulatory region 491780	1425 bp proximal
Tssr125412	transcription start site region 125412	674 bp downstream
Tssr125413	transcription start site region 125413	653 bp downstream
Tssr125414	transcription start site region 125414	607 bp downstream
Tssr125415	transcription start site region 125415	582 bp downstream
Tssr125416	transcription start site region 125416	550 bp downstream
Tssr125417	transcription start site region 125417	528 bp downstream
Tssr125418	transcription start site region 125418	487 bp downstream
Tssr125419	transcription start site region 125419	461 bp downstream