rs229515013 SNP Detail

Summary

• ID
  rs229515013
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:61928288 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATCCCAGG AGCTGGTCCC
  ACAGGCATCA TGGCATCTAG GAGGAGGAGG GCCCATCATT GGCATCATGG GAGGTCCTCC
  CATGTGGGAT GCAGGCATCC TGCCAGGACC CGGGAGTCTG GGGGAAGGTA GAATCATGGC
  CCCTGCAGGT GGAGGAGCAG AGAATGGAGC TGAAAGGATC TTTCCTTGTT GAAATGCAGC
  S
  GTTGTTTTGT CAGTCAGGCT CTGGGCCTGC TCTTCCATCA ATTTCTGGTA ATAGTCTTTC
  ACATTTGCTT TGTGTTTCAG ACCACTGCAG TGTGTCTTCC TCACAGACCG AGAAATTCGG
  GTTAGATATG TATCACAGTA GTCACAATAA AACTTAGGCA CGTTGCTCTA CAATCTGTTG
  GCTACCCGAG TCCCCACCAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325645788	CHEV_18_61954871	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229515013					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:61928288 () rs orientation: forward

Symbol	Name	Function Class
Gm35919	predicted gene, 35919	within coordinates
Rr346545	regulatory region 346545	888 bp distal
Rr356351	regulatory region 356351	1080 bp distal