rs229522462 SNP Detail

Summary

• ID
  rs229522462
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77838137 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCTAGACC AGCCTGGCCT
  TGAACTTCAC AGAGATGTCC TTGCCCGTGT CTCCCAGCTG CTGGGGTTAA TGGTGTGCAC
  AATCATGCCT GAGTCTCTCT CACTTTGTAC AATTGCTCCC CTTCTATTTG GAGTCAGCCT
  GGACATTTAC TTCCTGTAGT CTCTGTTGGT TATGCCTTCA GCCCATGCCT GGACCACTGT
  Y
  TTCCACGTTT TGGCTACTGT CCAGCCTACC CGAGCTCTCA GGGTAGAATG CCATTCTCTC
  GGAAGCCTTC CCCCCTCCCC CATCTCCTGT ACATGACACT CACTCTCAGT CCACCAGACT
  GTATTCTTGA GTTAGCTCAT CACATAGACA TCAGGTCCCA CAGGAGCAGA GCTGTCCCTA
  CCACGTGACA GCAGACCTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323014782	CHEV_9_77778662	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229522462					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77838137 () rs orientation: forward

Symbol	Name	Function Class
Elovl5	ELOVL fatty acid elongase 5	within coordinates
Rr401538	regulatory region 401538	10 bp upstream
Rr683432	regulatory region 683432	565 bp distal
Rr683433	regulatory region 683433	within coordinates
Rr683434	regulatory region 683434	1832 bp proximal