rs229583265 SNP Detail

Summary

• ID
  rs229583265
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:87886338 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAATTGTGT TGAGCTATCT
  TCAGACAACT TGGAAGGTAG CATGCTTAGG TCAGGTTAGA TGTCATCAAT GTCTTCATCT
  TCATCTCCAA TATCATCAAA CACGATTTCA TCATCATCCC CAGCACCAAA TGTGTCCGTT
  TCATTGATTT TGGCATGTTC TGGAAGTTCT CCATAGGCCT TCAGACTTCT TGCTTCATCT
  K
  GATTGTACTT TAAGATTACA TCAGCTTTGT TATCTTGATA GTCTCTTAGA CCAATCAATA
  TAATGTCTGA GGTATTTATC CAAACCTTTT TTCTCAACTT TCCTCTTATG TTGCACAGCC
  TCCTTACACC ATCAAAACAC ATTGCTTCCA ACCGTCCACA TCCCAGCATT TTGGTCACCT
  GAGCATACTC TTGCCCATAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	FVB/NJ	JF1/MsJ	KK/HlJ	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	PL/J	QSi3/Ianm	RF/J	RIIIS/J	SJL/J	SM/J	SPRET/EiJ	SWR/J	WSB/EiJ
ss386783804	MGP_WTSI_12_89158012	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	T	T	T	G	T	T	T	T	T	T	T	G	G	G	G	G	G	G	T	G	T	G	G	T	T	G	G	T	G	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	FVB/NJ	JF1/MsJ	KK/HlJ	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	PL/J	QSi3/Ianm	RF/J	RIIIS/J	SJL/J	SM/J	SPRET/EiJ	SWR/J	WSB/EiJ
rs229583265					SNP	G	G	G	T	T	T	G	T	T	T	T	T	T	T	G	G	G	G	G	G	G	T	G	T	G	G	T	T	G	G	T	G	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss386783804	MGP_WTSI_12_89158012	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:87886338 () rs orientation: forward

Symbol	Name	Function Class
Eif1ad14	eukaryotic translation initiation factor 1A domain containing 14	within coordinates