rs229586695 SNP Detail

Summary

• ID
  rs229586695
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:3399042 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACAT ATATACACAT ATACATACAT
  A
  TATAGAGACA GGCATATATA CATAT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323871706	CHEV_12_3349042	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229586695					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:3399042 () rs orientation: forward

Symbol	Name	Function Class
Gm26520	predicted gene, 26520	within coordinates
Rr267160	regulatory region 267160	1042 bp distal
Rr269408	regulatory region 269408	325 bp proximal
Rr269409	regulatory region 269409	941 bp proximal
Tssr112480	transcription start site region 112480	1145 bp upstream
Tssr112481	transcription start site region 112481	1224 bp upstream
Tssr115601	transcription start site region 115601	1243 bp upstream