rs229636740 SNP Detail

Summary

• ID
  rs229636740
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:141156184 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCCAACTT TTTGACTATG
  GAGTATGTTG AGACATTAGC TAAATAATCA TAGAATACTC TCTCTTAAAA TATTTCTATG
  AGTGGATATG ACACTTCAAA TAATTAAGGA AACCAAAATA TAAAACTGCT CAATATTTTA
  TACCAGAAAC ACAATACCCA TATACAAGAT TTCTGAATTA TCTTTTCTTA TTATTTATTT
  S
  TTGAGGTATA ACAGTATTTA ACAACTGGAG TTTATTTATT TTTTATTTTA TCCCAAGAAT
  AATTGCTTGT ATTTTGTGGT AATCATTTTT ATCAAAATAA GAACTTTATA GTAGATAAGG
  ATGCTACTAT AATGTTGGCA TTTGTGTGAA TTTATAAGTG AGTACAAAAG ACTGAAGTGA
  TGGGGTTTTT TGAGATTTTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320992248	CHEV_3_141113387	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229636740					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141156184 () rs orientation: forward

Symbol	Name	Function Class
Gm66152	predicted gene, 66152	within coordinates
Tssr32030	transcription start site region 32030	1225 bp downstream