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rs229706031 SNP Detail
Summary
  • ID
    rs229706031
  • Variation Type
    SNP
  • Alleles
    A/T
Genome Location and Flanking Sequence
  • Location
    Chr10:62108841 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      agggttcct ctgtgtagcc ctggctgtcc
    tggaacttac tctgtagtcc aggctggcct ggatctcatt gatctgcctg cttctgcctc
    cagagtgctg ggattagagg cgtgtaccac atgctagact ACAGAAATTA AAGCTGAAAA
    W
    TTTTAAAACT TTTCCTAATC CCAGTGACCC CAGGGAATGC CATTACATTC TTTTCTCCCC
    CTCTTCTTCC TCTTCTGTTG GAGAGAGAGG GCTGTCCAAG GTGACCTAGA GGCTCACCGG
    CTTCCCGCCT CACCTCGCCG CCCAGCTAGA                                 
    
    W = A/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss323331032 CHEV_10_61735810 CHEVERUD SCREENING_POP f SNP T A
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs229706031 SNP T A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr10:62108841 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Hk1 hexokinase 1 within coordinates
Rr215635 regulatory region 215635 441 bp distal
Rr215636 regulatory region 215636 1560 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory