rs229792067 SNP Detail

Summary

• ID
  rs229792067
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:115149330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCAGCATCT GCTTACAGAT
  GATACAAACT TCTCTGGGGG GGGAGGGTGA GAACGAGGTG GGGAACTGCT ACCCCCCCCC
  CCCCAAGGAA GGAATCCCAG TGCAGTTTCC TTGTGTTAGT TAAAACCTTG GCTTCTGTAA
  TGGAATCCTT ACACTGTCTA CACTGAGTCA CATAAAAATC TCAGCTGTGA TGTTACCTGT
  M
  CTGAGATCCA CCATAGCCCA CCTTCCCAGT GTGGGTCAGA CCGGCTTCTT GCCACAGACC
  TGGAAATCAT TCATCACCTT TAGCACTGAG GCGTCTTAGA AAATATATAA TGTGAGCACA
  ATTGTTTTGT GTGTTCTTTT GAGACAGGGT CTCACTGGGT AGCACTAGCT GGTCTGGAAC
  TTATTCTGCA GATCAAGTTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323484093	CHEV_10_114750481	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229792067					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:115149330 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2204	CpG island 2204	1389 bp proximal
Rab21	RAB21, member RAS oncogene family	within coordinates
Rr439191	regulatory region 439191	1333 bp distal
Rr439192	regulatory region 439192	151 bp distal
Tssr95806	transcription start site region 95806	1606 bp upstream
Tssr95807	transcription start site region 95807	1658 bp upstream
Tssr99318	transcription start site region 99318	1450 bp downstream
Tssr99319	transcription start site region 99319	1484 bp downstream