rs229792212 SNP Detail

Summary

• ID
  rs229792212
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:19599444 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAGTGAGT AAAGGTGCCT
  GCCACCAAGC TTGACAACCT GAGTTCTGTC CCCAGGACCT ACCTGGTGGA AGTAGAGAAC
  TGACTTCTGC AAGTTTCCCT CTGACATCCA CAGATACAGG TGTGGTTGGG GGGGGGGGGT
  AATATATATG TAATATATAA TGTATATATG TGTTATATAT ATATGAAATA AAAGTTTTCA
  R
  CCCTCTAATA CAACACTCCC CTCTATCTCA TTTTCCCTCT CTCCACTGAT TACGACCAAC
  TCCCATGATC CATTTGCCAC TGTTCAGTCT CTGTCTTAGG GTTTTATTGC TGTGAAGGGA
  CACCATGGAC CAAGGTAGCC CTTATAAAGG AAAACATTTA ATTAGGGATG TCTGACAATT
  CAGAGGTTTA GTCCATTATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323588544	CHEV_11_19549447	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229792212					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:19599444 () rs orientation: forward

Symbol	Name	Function Class
D11Hjk21	DNA segment, Chr 11, H. Jockusch 21	1754 bp proximal
Gm12027	predicted gene 12027	within coordinates
Rr249245	regulatory region 249245	1758 bp proximal