rs229927135 SNP Detail

Summary

• ID
  rs229927135
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:141016851 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTATTATG GTTTTCCTGT
  GCATAAACTT GCTAATTTGT AACCAGGGAG GCTTGAGAAA CTAATTTGTT TTCTTATGTG
  CTGGGTCTGC ATTCATTGAA ACAAATATTA CTGGGTTTTT TTTTCTTTTT TTTTTTCCAT
  TGTAGTGGCT GCAGTTGGCA GTTTCTTTCA AAGGAAGGTC ATTATGGAGC TAGGGAGCCT
  M
  CCCTTTCCCC CCTTAACTCT GTTCTTTTCT CATACCTAAG AGTATGTCAA AGGATTCCCT
  GTAATATTTT ATCATGATTT TGTGACATTT CATGATGAAG AATGAAGTGT GATATAAAGT
  TTTCCAAGTG AGGGTAAGAG AAGTAAGCTA GAGAGGTTTG CCTCAGACAC AGGTTCTGGA
  GTGATGCTTC ACTTCCTTGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320529850	CHEV_2_141000667	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229927135					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:141016851 () rs orientation: forward

Symbol	Name	Function Class
2900060K15Rik	RIKEN cDNA 2900060K15 gene	139 bp upstream
Macrod2	mono-ADP ribosylhydrolase 2	within coordinates