rs229965229 SNP Detail

Summary

• ID
  rs229965229
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:38125088 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGCAGAGT ACATAGCCTG
  ATGCACACTT GCCTGTGTTG GTCACTCCCT TAGCCCATAC AAAGGAAGAA TGAAAACCTG
  GGAACCATGA ATCTTGTTGC TTGCCACACT AGAGGGAGGC TCACTCTGAC TTCTCAATAT
  GGGCCTTGAA GGTTGCCTCC CATTGGGAGA CTTGAGCCTG CTCCCCCCCT CCCCCGCCCT
  M
  CCCCCTCCCC CCTACACACA CGCCCAGGTC CATCTCCTCA CCCTCTCAGT TCTACCTGCC
  AGGCTATCCA GTAGTGCTTT TTCTCTGGTT CATTTAGGTA TTGCTTGCTG TGCCTTAGAA
  ATGTTGTGGT GTTAACAGTT TTTATTGTCT TGCTTCAAAC ACATGTATCT TGGTTTCATT
  GTTAACTTAT TTTTAGTCTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324319276	CHEV_13_38032981	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229965229					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:38125088 () rs orientation: forward

Symbol	Name	Function Class
Rr283322	regulatory region 283322	within coordinates
Rr388285	regulatory region 388285	1979 bp upstream
Rreb1	ras responsive element binding protein 1	within coordinates