rs229989752 SNP Detail

Summary

• ID
  rs229989752
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:11346687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATACTCCA ACCACAGTTT
  ACACTTTTCT TCTTCTCTCA GTCCTTTCTC CCTACCCCCA TCCTCCCTAC TCCCCCATCC
  ACTCCTCCTC CATTTCTCTT CAGAAAAGAG AAGGTCTCCC ATGGATATCA AACAGTCCTG
  GCATATCAAG TTGCAGCAAG ACTAGGCACA TCTTCTCCTA TTAAGGCTAG ATAAGGCATC
  Y
  GAGTAGGAGG AATGGGTCCC TAAGGCAGGC CACAGAGTCA AAGATAGCAC CCACTCCTGC
  TGTTGGAGTC TCACATGAAG ACCAAGCTAC ACAAACTATA ACATATGTGC AGAGGGCCTA
  GTTCAGTTCC ATGCAGGCTC TCTGACTGAC AGTTCAGTCT CTGTGGGCCC CTGTGGACAT
  AGGTTAGTTG ATTTAGTGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325721048	CHEV_19_11443813	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229989752					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:11346687 () rs orientation: forward

Symbol	Name	Function Class
Ms4ac	membrane-spanning 4-domains, subfamily A cluster	within coordinates
Rr544325	regulatory region 544325	1919 bp proximal