rs230005742 SNP Detail

Summary

• ID
  rs230005742
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129957480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAGAAAAA GAAGCAATCA
  CACCAGTCTA CAGGCAGTGA GAGTCTCCCC ATGCCCAAAT CACACCATTC TAGATATATG
  AGGAATATAG CAATGACAAA CATGAGCAGG CACAGCAGCA CCAAGAAGCA ATCTGAAGAT
  TAAGCCCCTG GGGCTGTGCC TCACTGAAGT ATATCCATTG CAGCTATGCA AAATGGTGGA
  Y
  CATCTTCAAG AAGCTCACCT GCTTACTGCA ATTCTTCCTG AATGGTTTCT GCCAATTTTT
  CTTGAAATTG GAAAAGAAGT CTTTACTATC TACTACACAG CCAGTTGATA CGATAATACA
  TGTTACAAAA CTTTACATAG CATACATGTT AATACTTAAT GTTAAAGTCA TTACATATTC
  TGACAACGTA TTTCTGAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323544204	CHEV_10_129558667	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230005742					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129957480 () rs orientation: forward

Symbol	Name	Function Class
Gm5181	predicted gene 5181	402 bp downstream