rs230079182 SNP Detail

Summary

• ID
  rs230079182
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:6609549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTGTTGTT GTTGTTCTGT
  TTGCTATGTG TGGGTCTTAT TTTGTTTTGT TTTGGTTTCT ATTTTATGGC CTGTATTATA
  GTTAGGGTTA CTAATACTGT GATAAAACAC CATGAACAAA TCAACTTGGG GAGGAAAGGG
  TTTATTAGAC ATTCCCTTCC CACTCACTGT TCATCACTAA AGGAAGTCAG GAAAGGAACT
  S
  AAACATGACA AGAACCTGGA AGTGGGAGCT GATGTAGTGG CTGTGGCTTG CTCATCATGG
  TTTGCACAGT CTGCTTTTTT ATAGAACCCA GGACTGCTAA CCCAGGCATG GTACCACTCA
  GAGTGGACTG GGCCCTCAAA CTGCAATCAT TAACTAAGAA AATGCTGTAT CCCCTGAATT
  TATGGAGGCA ATTTTTCAGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321732607	CHEV_6_6559549	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230079182					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6609549 () rs orientation: forward

Symbol	Name	Function Class
Gm66705	predicted gene, 66705	1193 bp upstream