rs230092254 SNP Detail

Summary

• ID
  rs230092254
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:59039520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGTATCAA AAGACACAGC CTTCTGTTTC
  TGCATTTCCT AGCTTTagaa ggtgcacata ctccagaaaa tcaaataacc ccattaaaaa
  atggggtaca gagctaaaca aagaattctc aactgaggaa taccaaatgg ccgagaagca
  Y
  gtgaaaaaat gttcagcatc cttaatcatc ggggaaatac aaatcaaaac aaccctgaga
  ttccacctca caccagtcag aatgactaag atcaaaaatt caggtgaccg cagatgctgg
  cgagaatatg gagaaagagg aacactcctc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319738142	CHEV_1_59057205	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230092254					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:59039520 () rs orientation: forward

Symbol	Name	Function Class
C2cd6	C2 calcium dependent domain containing 6	Intron
Gm55816	predicted gene, 55816	within coordinates