rs230106500 SNP Detail

Summary

• ID
  rs230106500
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13335452 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCTACACA AGAGGGAAAG
  GGGAGGGGAG GGGAGGGGAG GGGAGGGGAG GGGAGGGGGG AGAGGAGGGA AGAACTGACT
  CCACATGTCC ACCTCAGAAT AAAAGAAATG ATAAGATTTA TTTCTATTTT ATGTGTATTT
  TATGTCTGCA TGTCTAGTGC CCATGGGAGC CAGAAGAGGG TGACGGATCC CTGACATCAA
  R
  GACATCAGTG AGCTGCTGTG TGGGTGCTGG AACCCAACCC TGAGTCTCCC TGAAAGTTCT
  CTTAACTGCT GAGCCATTTC TGTGGCTCCA GTAATAAAGG TTTTTAAAAA CAATAATCAA
  GAGATAAATC TAAGGAGTGT TTGCTTTGCA TTAAAAAAGT TAAGAGAACG GGGGTTCAGT
  GGGAAGAAAT GGGAATTGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505810	CHEV_8_13285452	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230106500					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13335452 () rs orientation: forward

Symbol	Name	Function Class
9530085L11Rik	RIKEN cDNA 9530085L11 gene	within coordinates
Cpgi20111	CpG island 20111	1626 bp proximal
Dcun1d2	defective in cullin neddylation 1 domain containing 2	within coordinates
Rr659903	regulatory region 659903	1428 bp proximal
Rr659904	regulatory region 659904	1948 bp proximal