rs230111360 SNP Detail

Summary

• ID
  rs230111360
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137641462 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGTCGTGCA CACAAGCAGC
  TCTGGGCCCC CGGAGAGCCC CTTCCTGTGC AGCGGTACTC TGAGGCTGGT TTCCAGCCCT
  GCTTCAGCCC CATCCATCCC GAGATCTGGG CCACAACTCA GATGCAGAGT TGAAGCCCAG
  AACTCTCCTG CCCTGAACTT TTCACGGAAC AGCCTAGGAT GGTAGTAGTG GTGATGGGGG
  S
  GGGGGGACTC TCCCGGGGTT ATAGGGACCC AGCTTCCAGC ACCAACAGTT TAAAGCTATC
  CCTGCTTCAG CTAAGAGGGC CCGGCCTCCC TGGAGTCCTA ACTATGAATA TGAAACATTA
  CTATGCCTTT ATTTCTCGCT CTTCTCTCTG ACTACCACAG TTAACAGGGG GTAGGTGGAG
  GTGGCTTTCT GTCCTCTCTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321368875	CHEV_4_137470066	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230111360					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137641462 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15141	CpG island 15141	54 bp distal
Ece1	endothelin converting enzyme 1	within coordinates
Tssr39791	transcription start site region 39791	612 bp downstream
Tssr39792	transcription start site region 39792	587 bp downstream
Tssr39793	transcription start site region 39793	423 bp downstream