rs230191914 SNP Detail

Summary

• ID
  rs230191914
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43059319 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGTGGTTG CACATCTATA
  CTCCAACCCT TAGGAGGGAG AGAAGCAAGA CGATCAGGAG TTCGAGGTTA TCCTTGGCTA
  TGTAACATAT ATACATGATA GAATCCATGA TCTTGTATAA ATGGAGCAAA GGTTGCTGGG
  GAGATGAGTA GGCTGATAAA GAGTTTGACA CACAGCCAGG CGCGGTGGTG CACACCTTTA
  R
  TCCCAGCACT TGGGAGGAAG AGGCAGGCGA ATTTCTGAGT TTGAGGCCAT CCTGGTCTAC
  AGAGTGAGTG CCAGGTCAGC CAGGGCTACA CAGAGAAACC CTGTCTCAAA AAAAAAAAAA
  AAAAAAAAAA AAAAAAGAGT TTGACACACG AGTGTGGAGA ATGGGATTTG AACCCTCAGA
  GCATGCATAA AAGCGAGTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322196845	CHEV_7_50665265	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230191914					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43059319 () rs orientation: forward

Symbol	Name	Function Class
Rr645953	regulatory region 645953	1681 bp distal
Rr645954	regulatory region 645954	1321 bp distal
Siglecg	sialic acid binding Ig-like lectin G	within coordinates
Tssr65984	transcription start site region 65984	1684 bp downstream
Tssr65985	transcription start site region 65985	1675 bp downstream
Tssr65986	transcription start site region 65986	1639 bp downstream
Tssr65987	transcription start site region 65987	1622 bp downstream
Tssr65988	transcription start site region 65988	1610 bp downstream
Tssr65989	transcription start site region 65989	1377 bp downstream
Tssr65990	transcription start site region 65990	1356 bp downstream
Tssr65991	transcription start site region 65991	633 bp downstream
Tssr65992	transcription start site region 65992	622 bp downstream
Tssr65993	transcription start site region 65993	594 bp downstream
Tssr65994	transcription start site region 65994	475 bp downstream