rs230226884 SNP Detail

Summary

• ID
  rs230226884
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:10607592 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCCTTCAC TGAAGATCTA
  GAGGTAGTTA GTTAATGGCT GGTAGAGGGA GAGACATTTT CTTTTGAGTG CAAGCACTCT
  AAGATGTGAT CCCATAAAAA TCCCTAACTA GGGCTGATGA GATGGCTAAG CGGGTAAGAC
  ACTGACTGCT CTTCCAAAGG TCCTGTGTTC AAATCCCAGC AACCACATGG TGTCTCACAA
  Y
  TACCCGTTAT GAGATCTGAC AACCTCTTCT GGTTCATCTG ATGATAACTA CAGTGTACTT
  ATTTATAATA ATAAATCTTT GGGCTGGAGC GAACAGAGAC TAAGTGAGCA GGACCAACTA
  GAGCAAGAAG GTCTGACCTG AGCAAGGAGA GGTGCTAAAT TCAATAACCC AACAACCACA
  TGAAGGCTCA CAACCATCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325524283	CHEV_18_10607590	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230226884					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:10607592 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9702	CpG island 9702	1840 bp proximal
Esco1	establishment of sister chromatid cohesion N-acetyltransferase 1	within coordinates
Rr533778	regulatory region 533778	1532 bp proximal