rs230228895 SNP Detail

Summary

• ID
  rs230228895
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:3843147 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAACCCCAA GAGTTTTAGC TGTGGCATAT
  TGTACATCTG TTTTGCACAA AGGAAAATAC TCCTTTAGAC TCTTTTCCAA TCATGTCTTT
  CTTGGGGGGG GGGCAGATGG AGAGTGTCAT GGAGTAGGAG AGAAAGACAG GGGCATGTTA
  Y
  TTGAGAAGTG GAGGAGGGCT TGGCTCACCA GGGTTTAGGG AAGAACTCCA GGGCCAGGCT
  TCTCTCTCCC TGTAGGTGTG GCATTGGCTT AGGAAACTCC AGGGAGACCT GCCTAGCCAA
  GGGGAGAAGC CATAGAGCAC ATAGTCCCTG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323872817	CHEV_12_3793147	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230228895					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:3843147 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4361	CpG island 4361	952 bp distal
Gm60243	predicted gene, 60243	within coordinates
Rr403217	regulatory region 403217	1027 bp downstream