rs230242537 SNP Detail

Summary

• ID
  rs230242537
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:108090106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttttcatga tgttttctat agttggtttt
  tgttgctatt gctttctctc tctctctctc tctctctctc tctctctctc tgtgtgtgtg
  tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtttatt ggggtatgtt gcaaatgcaa
  R
  ggagactagg agatgagcag gactgagata catgatgtga aactaacaaa gaatcaataa
  gaagttAAAA TATACTTAAA GATCAAAGTG TTAATCTTTT TTTATTCTGG ACAATTAAAA
  GTCAAACTTC AAGATAACAA TATCTACATT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320453211	CHEV_2_108099918	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230242537					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:108090106 () rs orientation: forward

Symbol	Name	Function Class
D2Mit58	DNA segment, Chr 2, Massachusetts Institute of Technology 58	2 bp distal
Gm13912	predicted gene 13912	within coordinates
Gm57698	predicted gene, 57698	1792 bp downstream