About   Help   FAQ
rs230243478 SNP Detail
Summary
  • ID
    rs230243478
  • Variation Type
    SNP
  • Alleles
    T
Genome Location and Flanking Sequence
  • Location
    Chr12:4562025 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CCTTTGGTCT TCATCTGACA
    GAAAAAGGAA AGAAAGCTTG TACACTAGAC AGTTTGTTTA AGGTCACAGA GCTAGTGAGT
    AGTGGGATTG AGAGTCCTCT CTGGGTACAC CTGAGTCTAG AGTCCCCTGA TCGGGGCTAC
    TGAGCTCAAA GTTATACCTT AAGTGGTGAG TGCTACAGCA GAAGGTTGTG GTGCTAAACA
    T
    ACATATATAC ACATATAATA CACATATACA TACATACATA CATACACACA TACATACACA
    CACCAAAAAA TATATATATA CACTTACATA TATATATATA CATACATACA CACATATACA
    CATACATAAA CACAAAAATA TATACATACA CTTACATATA TATATATATA TATACATACA
    CACATATACA CATACATAAA                                            
    
    T = T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss323873976 CHEV_12_4518833 CHEVERUD SCREENING_POP f SNP T T
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs230243478 SNP T T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr12:4562025 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
2900045O20Rik RIKEN cDNA 2900045O20 gene within coordinates
Rr265385 regulatory region 265385 1624 bp distal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/17/2024
MGI 6.24
The Jackson Laboratory