rs230290764 SNP Detail

Summary

• ID
  rs230290764
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28221338 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCATCAGCA TCTGTGTAAA
  GAATCCTAAG GTGCCATGGG CACAGAGCAG AGCTTCCTGT TGGGAAGCCA TGGAAGCAAG
  CTGGATGCAG AGCTTAGCAA GGAACCCGGG GGCGGGGGCG GGGGGGGGGC AGAAGGGTGA
  GATGAATCTG GAGTAATGAC AGTCTTAGCT CTTCCTTGAG ACTCTAGCAG GCTCAGCACT
  R
  CAGCAGCTGC AGAAGAGAAA GCAAATGGTT GTGAAGACCC AGTGTAGGAA CTGTCCAAAG
  CCATGGGGCA GAGAGGCCAG GCATCCATAA GGTCGCTTGC TAGGGAAGGT GTCACAGCAG
  GAGGAACTTG ATCCAGGCCA GGCTGTTAAG GAGAAGGGCA GGGGTATGAG GGGCAGGGAA
  CTATGACAGG TGGTGAATAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325351153	CHEV_17_28139309	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230290764					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28221338 () rs orientation: forward

Symbol	Name	Function Class
Anks1	ankyrin repeat and SAM domain containing 1	within coordinates
Gm35290	predicted gene, 35290	2 bp upstream
Rr340975	regulatory region 340975	within coordinates