rs230337823 SNP Detail

Summary

• ID
  rs230337823
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:36076777 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGCAGCCTCT CCCCGTTTAT
  GTGGTACCAG CAGTGACACT CTGGGCTTTG TGCATGTGAG GCAAACTCCC TACCCACTGA
  GCCACATCCC CAGCTTATTT AATCTTATGT TCTGTAGAAC TGGAAACTGA ACTTAGGGCC
  TTGCACGCGC TAGGCAAGTG CTATACCATT GAGTGGTATC CCAGCCTTCT TGAAAAAAAA
  W
  TTGTGCTTGT TTTTGAGACA GGTTTTTTTG TGTAGCTCTG GCTGTCCTGG AACTCACTAT
  GTAGACCAGC CTGGTCTCAA ACTGTCCCTC TGCCTATGCC TCCTAAGTGC TGGGATTAAA
  GACATATGCC ACTATTACCC TGCAAGTTTA CTTATTTGTA TCGTGTGTGC ATGCACATAT
  GTATGCAGGT ATGCTCACTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325584128	CHEV_18_36103378	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230337823					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:36076777 () rs orientation: forward

Symbol	Name	Function Class
Gm56493	predicted gene, 56493	within coordinates
Rr536031	regulatory region 536031	1316 bp distal
Rr536032	regulatory region 536032	1766 bp distal
Rr536033	regulatory region 536033	514 bp distal
Tssr150585	transcription start site region 150585	1315 bp downstream