rs230352465 SNP Detail

Summary

• ID
  rs230352465
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:9824191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATTCACAG AAACTCACCT
  CCTGGAGCTT TGGCGTTCTC ATTTGCCCAT ATACTCATAC CCTATTCCTG CGTTAGTCTG
  GTGTATGGAA CTATGAGCTC TCTTTTAGTA TTTTATTATA AATGCCTTTT AAGATTAAAT
  TCTGATATAG TTAATCTCCC CAGTGTTCCA AGGTCCCAGA AGCCTACGAG CTTGGAATCC
  R
  GCAGGAATGC AGTAAGGAAG TTACCTATTC AGTAATAATT AAGCATTACA AAAGACGAAG
  CCAGTAGCTC AGAGCTGGTC TGCAAAATAT TTACTAAGGA CAGTAGCAAA TCTTACCCAA
  AGTAGGGAAT ACCATAATAG AGCCAGGGAA TCCCACTGAG ATAGAAATCT TCAGTACAGG
  CTGCATTGCA TATTAGAAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323558262	CHEV_11_9774194	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230352465					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:9824191 () rs orientation: forward

Symbol	Name	Function Class
Tssr106858	transcription start site region 106858	437 bp upstream
Tssr106859	transcription start site region 106859	375 bp upstream