rs230359811 SNP Detail

Summary

• ID
  rs230359811
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:20906634 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTG TCTCCTCAGT GATGGGGCCA
  S
  AGGCTGGTAC TACCACCTGC AGGTC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CAST/EiJ	CZECHII/EiJ	DBA/1J	DBA/2J	JF1/MsJ	LP/J	MOLF/EiJ	NON/ShiLtJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	SPRET/EiJ	ST/bJ	ZALENDE/EiJ
ss919713355	MGP_WTSI_9_20995338	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CAST/EiJ	CZECHII/EiJ	DBA/1J	DBA/2J	JF1/MsJ	LP/J	MOLF/EiJ	NON/ShiLtJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	SPRET/EiJ	ST/bJ	ZALENDE/EiJ
rs230359811					SNP	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss919713355	MGP_WTSI_9_20995338	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:20906634 () rs orientation: forward

Symbol	Name	Function Class
Rr193936	regulatory region 193936	within coordinates
Rr203233	regulatory region 203233	within coordinates
Rr208290	regulatory region 208290	1565 bp proximal