rs230364707 SNP Detail

Summary

• ID
  rs230364707
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84512577 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgtggttgc tgggatttga actctggacc
  ttcggaagag cagtcgggtg ctcttaccca ctgagccatc tcaccagccc TAATTTATAC
  CTGTTCTGAT AGTTCTCCTG AATATCTTGT CATTGTCTTC CCTATAGCCA AATAAATGTC
  W
  TTGAGTCTTT AGTTGGCTTA GAATACTTTT TGTTTGTGAT GACCCTTTCT TTTGCAAAGT
  ACAGACTGTG ATTTCAGAAG ACACACAAAA AAGACAACAA TGGAATAAGT CACAAGGACA
  GTGAGAGGAA TGCCCCTGCC TGCCATGACA                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325261461	CHEV_16_84715934	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230364707					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84512577 () rs orientation: forward

Symbol	Name	Function Class
Mir155	microRNA 155	1485 bp downstream
Mir155hg	Mir155 host gene (non-protein coding)	444 bp downstream
Rr518522	regulatory region 518522	1343 bp distal
Rr518523	regulatory region 518523	485 bp proximal
Tssr139173	transcription start site region 139173	1483 bp downstream
Tssr139174	transcription start site region 139174	701 bp downstream
Tssr139175	transcription start site region 139175	602 bp downstream
Tssr139176	transcription start site region 139176	69 bp downstream