rs230375652 SNP Detail

Summary

• ID
  rs230375652
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:85590192 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACGCTAGGG CTCATGCAGA
  GAGCAAAAGC TGCCTGGCTT CCTAGGTCTG GGCACAGGGC TTCCCTCCAC ATGCTGGGCA
  AACCGGTCTG AGGCCTGAAA GAAGCAGGTC TTTTTCCCTT CTGAGAGCAG AGCTACCTGA
  GACCAGAGAC TGAGCCTCAG TTTCTTCAGC GATCTCTGCT GGCCTCTGGA AGTGCTAGTC
  R
  TTAGGGACAG ACTGGCCATG AGTGTCCAGC CAGGGTCTGC ACTTGCGCCC GGCTGGCCAC
  CATGGGGAGT TAGGCTGCCT CCCACAAGGA AAGACTGTTT TGAGCCTCCC CCAGCAAGGT
  CAGCTCAGGC CACCCTGAGA AGAGGGAGGG ACAGAACCAG AGCCCACGAG GGGGGGGCTC
  TTCCTGCCTA AGGGGAAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325042847	CHEV_15_85536421	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230375652					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:85590192 () rs orientation: forward

Symbol	Name	Function Class
Lncppara	long noncoding RNA near Ppara	within coordinates
Mirc31	microRNA cluster 31, including Mirlet7c-2 through Mirlet7b	612 bp proximal
Mirlet7b	microRNA let7b	1328 bp upstream
Mirlet7c-2	microRNA let7c-2	612 bp upstream
Rr507292	regulatory region 507292	within coordinates
Rr507293	regulatory region 507293	1150 bp proximal