rs230388006 SNP Detail

Summary

• ID
  rs230388006
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4272893 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAAAGAAA AAAGAAAAGG
  TGAGGTAGAC ATCTAGGCTC AGGCACAGAC CATGCCCGTC AGAACAGTAA GAGGTCTACT
  CAGAACTCTT CTACATCCTC CGTTCAGATG CCAAAGAACC AAGTCATCCC TTCCCGCCTT
  CCCACTGCCA AGTCCCTATT CCATGGGCAG ATAACTGCTG CTTAGGGTCA GCCCTATCAG
  Y
  GAACAGGCAC AGGATATGCC AGTCAGAACA GAGAACCTCT GCTGGACCAA AGACCAGGCT
  AACTGCCAGG CAGTCTAGCC TCCACCTCTG TTGGAGACTC CCTGGTGGAC CATAGCTACC
  ACTCTACTCT ATAAGTTGGA AAACCTAAAA GAAATGAACA ATTTTCTTGG TAGATACCAC
  TTACCAAAGT TAAATCAAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873741	CHEV_12_4222893	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230388006					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4272893 () rs orientation: forward

Symbol	Name	Function Class
Cenpo	centromere protein O	within coordinates
Gm48210	predicted gene, 48210	within coordinates