rs230438427 SNP Detail

Summary

• ID
  rs230438427
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:86844987 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCCTTTTCA AAATGAATGT TTTATTAAGT
  GGGTGAAGTC TAAAGATGGT GTTCAAGTAT CATGAACAGT GTCATTAGGC CCAGCGTAGT
  TCTGTCAAAC ACTGAGACCA TTGCCAATTC CCATGAATTA AAGTAAGAGG CTTGTACAAG
  Y
  GATACATACT ACATTTTAAT GAACTTTGCT CTGCAAATAA TGACAACATG GATAATATCC
  ATCCTTAAAA CATGAAAATA GATAGACCTG TGCTTTAGGG TGAGCAGGAA CTCGGTCATT
  TCTTTGTTTA GTGAGGAGGC CTGAACCCCT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319828873	CHEV_1_88813840	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230438427					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:86844987 () rs orientation: forward

Symbol	Name	Function Class
Dis3l2	DIS3 like 3'-5' exoribonuclease 2	within coordinates
Gm37967	predicted gene, 37967	727 bp upstream
Rr414702	regulatory region 414702	374 bp distal