rs230438692 SNP Detail

Summary

• ID
  rs230438692
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:17152642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGATGAGG AAAGATACAA
  ATATGCTTTT ATTCTGTTTT CCCAAGATTA TCTGCTAACA TATTTGTATT TTTACAGATG
  TTTGCTTTTG CTGCTGCTAT GCAAAATCAC CCAGCAATGG CTATGAGGGT TTAGTTCGCA
  TCCCTGTTCG GTGCTAGCAC ACTGATCTGC ATGTTTGTTT TTGTGATGGT ACTATGCTAT
  K
  TTGGTTACAT TAGCTCTGGT TTTATACTTT GAAATAGGGT ACTATGTTTC CTTAAACACT
  GTATTTTTCT GTGGAGCATT ACTTTGAGAG TTTAAATCTT CTCTATTTGC TTGCTTCAGT
  TCATGAAACC ATCAGACCAC TCAGGGTTGT CTTTTTTCCA TTTGATGACT TCTTAAAAAT
  TATTTTTCCA TTAATTTATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325539577	CHEV_18_17178094	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230438692					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:17152642 () rs orientation: forward

Symbol	Name	Function Class
Gm58605	predicted gene, 58605	within coordinates
Rr344746	regulatory region 344746	159 bp proximal
Tssr150151	transcription start site region 150151	492 bp downstream
Tssr152558	transcription start site region 152558	600 bp upstream