rs230499082 SNP Detail

Summary

• ID
  rs230499082
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:10290610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CATCTGGAA GAAGCCCTTC CTCAATATAC
  TCCCAGATCT GCTATGGGAA AAGGTCAGCT GCACCTGTGT CTCCTAGGAT CCCCACTTGC
  ACGGACATGC TCTCCACCAG AAACATGTGG CCACAGCTGC AGGCTCCACT CACGGTGGCT
  R
  CTCTTGAGCT TCCTCCCCAC ATTGCTCATG TTGATACTTT TGTTCTTACT AAGAAGGTTT
  CATCAGCCCA ACACAGCCTA CAGGAGGCCA GATTCAATTC TGAATTTTAA GGATATGCGT
  AATCTACATG GTCATCCTAG ATTAGAGGTG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321472802	CHEV_5_10240643	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230499082					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:10290610 () rs orientation: forward

Symbol	Name	Function Class
Speer1c	spermatogenesis associated glutamate (E)-rich protein 1C	1103 bp downstream