rs230598936 SNP Detail

Summary

• ID
  rs230598936
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:62395673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGTACACACC ACACACACAT ACCCCACACA TATATATACA
  CACATATACA CACACACAGA CCACATACAC ACACATACAC ACATCTCACA CACACACACA
  Y
  ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATGAGGAG
  CTATGACCCT GCTTTATCAG TACAGGGAAA TGAAGGGCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322982737	CHEV_9_62336198	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230598936					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:62395673 () rs orientation: forward

Symbol	Name	Function Class
Coro2b	coronin, actin binding protein, 2B	within coordinates
Cpgi21898	CpG island 21898	378 bp proximal
Rr368794	regulatory region 368794	494 bp upstream
Rr680797	regulatory region 680797	588 bp proximal