rs230715441 SNP Detail

Summary

• ID
  rs230715441
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:59788611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCATTTTA ACTAAAACAA
  AAATAAAAGG ACTGAGCGTG GAATACACAC CCATCATCCT GTCACTTAGG TAGATCAGTT
  CACGAGGCAG GAAGATCAGT TCAAAGGCCA ACTTTGGCTA CATGGTCAGT TTGAGGCCAG
  CCTGGGAGAC TGCCTTAGGC AAAACCGAAG AAAAAAATAG TAACATTAAC TGCAAGAAAT
  A
  CCTGCAGGAT ACCTGGGATC TCAAGATTTA GGGGATGAAG GCAGCAAAGT CAATTCAAGG
  CCTTAGCTGC ACAGTGAGTT CCGAGGTCAA CCAGGCTACA CGAGAGCTTA TCTCAAAAAG
  CAAAACAAAA AAGTGTCAGC CCTGGATTCC TGACATCGCC AGAAAGAGTG GCTTCAGAAC
  AGCTTGGAAC TTGTGTTTTG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324357476	CHEV_13_59742158	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230715441					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:59788611 () rs orientation: forward

Symbol	Name	Function Class
Golm1	golgi membrane protein 1	within coordinates
Tssr4093	transcription start site region 4093	560 bp upstream
Tssr122874	transcription start site region 122874	625 bp upstream
Tssr122875	transcription start site region 122875	608 bp upstream