rs230735326 SNP Detail

Summary

• ID
  rs230735326
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127756153 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGAATCTA AAGTCATTCT
  AAAATAAAAG TTTACTTAAT TAAAATACAC ACACACAAGC TGTGTGAACC AGGCATGGTG
  TTGTTCACCT TTAACTCAGG AGGCAGAGGT GGGTGGGTCT TTGTGAGTCC AGGGCCAGCC
  TGGTCTACCT AGTGATTCTA GGACAGCCAG GGCTGTATAG AGAGACCCTG TCTTTAAAAA
  W
  TTTTTTTTAA TTAAAAATCT GGATGTGATA GCTCATGATT ATGAACCCAG TGCTGGGGAG
  TGGGTGACAG GTGGTTCCCT GGGGCTTGCT GGCCAGCCCA CTTGATGATC TCCAAGCCAA
  TATGAGACAT AGAAACATTG TTCCAAAAGA CAAGGTGCGT GGTTCCCGAG GAACAACACC
  CAAAGCTGTC TTCTAGCCTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	CAST/EiJ	DBA/1J	DBA/2J	I/LnJ	KK/HlJ	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SPRET/EiJ	ST/bJ	ZALENDE/EiJ
ss382194469	MGP_WTSI_10_127357340	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	T	A	A	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T	T	T	A	T	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	CAST/EiJ	DBA/1J	DBA/2J	I/LnJ	KK/HlJ	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SPRET/EiJ	ST/bJ	ZALENDE/EiJ
rs230735326					SNP	A	A	T	A	A	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T	T	T	A	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss382194469	MGP_WTSI_10_127357340	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127756153 () rs orientation: forward

Symbol	Name	Function Class
Gm15905	predicted gene 15905	785 bp upstream
Gm40804	predicted gene, 40804	within coordinates