rs230738597 SNP Detail

Summary

• ID
  rs230738597
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:59436452 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tggtcctgc cttgagtgtt tgccttgact
  tctttctcta aaggactgtg atctgagaat tgtaagctaa aataaactct ttcctcccca
  aattgtttct ggctgtgctg ttttatcaca gtagaaaccc taaGACAGAG ACCCAAGGGG
  R
  AAGGAAGAAA GCCTACTGAA GTACCAGATG TCAGAGGTGG AGGGGAGCCA TTCTAGAAAG
  CTGAGACATC AAATACCCAA AGTAATGGTA AAATTCACTA GGCAACCAAt aatccctaca
  ctggggaggc agaggcaggg agatatctga                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321141015	CHEV_4_59449324	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230738597					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:59436452 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14346	CpG island 14346	1437 bp proximal
Rr101075	regulatory region 101075	548 bp proximal
Susd1	sushi domain containing 1	within coordinates
Tssr37430	transcription start site region 37430	1701 bp upstream
Tssr41933	transcription start site region 41933	1838 bp downstream
Tssr41934	transcription start site region 41934	1893 bp downstream